Potency Assays for Measuring the Engraftment Potential of HSPCs
Potency Assays for Measuring the Engraftment Potential of HSPCs
- Document # 29840
- Version 1.0.0
- 9/1/12
Introduction
The transplantation of hematopoietic stem cells (HSCs) obtained from bone marrow (BM), mobilized peripheral blood (MPB) and umbilical cord blood (CB) has become an established therapy to regenerate the immuno-hematopoietic system in cancer patients following ablative chemo/radiotherapy and in patients with non-malignant hematological disorders. An important question in this field is how to measure the number of hematopoietic stem and progenitor cells (HSPCs) in a cellular product prior to its infusion. This information can be used to assist in graft selection and, ideally, to prospectively predict the likelihood of successful engraftment. While numerous “potency” assays have been adopted for this purpose, investigators disagree about the value of the different methods used, and there remains a critical need for assay standardization. These assays are particularly important for CB transplantation because most allogeneic CB units currently stored in public banks contain low numbers of viable HSPCs and are thus unsuitable for transplantation, particularly of adults.1,2 Data from the National Marrow Donor Program (NMDP) presented at the 2012 Cord Blood Symposium indicated that ~80% of currently stored CB units fall into this category. The need to improve the quality of the CB inventory should drive adoption of the most biologically informative and accurate potency assays but this will need to be balanced against the cost and practicality of performing each type of assay in a routine lab setting. Cord blood banks are facing increased global competition and cost pressures due to constrained funding. Clearly, continuing to expend increasingly limited resources to bank unsuitable CB units is not sustainable. The choice of assay can be used by CB banks to champion their products to make them more attractive for transplant physicians and parents. This in turn should increase profitability and improve the quality of the worldwide CB repository. This article reviews the assays that are most commonly used to measure the “potency” of hematopoietic cell grafts, with specific consideration given to what these assays do and do not measure, and summarizes key studies that demonstrate a positive correlation between these assay end-points and the rate and success of hematopoietic engraftment.
Hematopoietic Stem Cell Transplantation
All mature blood cells are produced by a small population of multi-potential hematopoietic stem cells that reside primarily in the BM in adults. In the late 1950’s, it was first shown that HSCs could be harvested from the BM of a donor, transplanted into a patient whose own hematopoietic system had been ablated by chemotherapy or radiation, and that the transplanted cells could regenerate the blood and immune systems.3 Stem cell transplantation is now a widely used therapy for a variety of malignant and non-malignant hematological disorders. HSCs can also be collected from “mobilized” peripheral blood following treatment with agents that stimulate the migration of stem/progenitor cells from the BM into the circulation (e.g. granulocyte colony-stimulating factor, or the small molecule drug Mozobil® [Plerixafor]). Umbilical cord blood has become recognized as a rich source of HSCs and is now often cryopreserved for future use by parents who elect to bank their child’s cells for autologous transplantation, or who donate the cells to a public bank for allogeneic transplantation.
Engraftment following HSPC transplantation is typically considered to be successful when the numbers of neutrophils and platelets in the circulation have recovered to a sufficient level that the patient no longer requires treatment with supportive drugs (e.g. human growth factors, antibiotics) or blood products (e.g. red cells, platelets). Typically, this is defined as >500 and 50,000 neutrophils and platelets per µL of blood, respectively. Successful treatment for the underlying hematological disorder (usually cancer) is defined by the duration of disease-free and overall survival.
Hematopoietic cell grafts are typically manipulated in different ways in the laboratory before transplantation. Common procedures for CB-derived grafts involve automated processing to reduce the overall volume to a size that can be more readily stored and infused. Removal of red blood cells is also advantageous as many are lysed during cryopreservation. Infusion of this erythrocyte lysate can increase the likelihood of renal and/or cardiotoxicity in the patient. T lymphocytes can be depleted from allogeneic grafts to reduce the possibility of graft-versus-host disease. Alternatively, T cells can also mediate beneficial graft-versus-leukemia effects that improve survival. Processed hematopoietic cells are often cryopreserved for future use. This procedure and the subsequent thawing and washing steps often result in reduced recovery of viable CD34+ cells and functional progenitors. In order to monitor the effects of these different manipulations on HSPCs, it is critical that appropriate assays be used to assess the functional potential of the final cell product for transplantation.
What Assays Can Be Used to Quantitate Hematopoietic Stem and Progenitor Cells?
Hematopoietic cell grafts can be analyzed using several different assays to determine their content of HSPCs (Table 1). This information is useful for the purposes of quality control in CB banks and transplant labs where it is critical to determine the impact of various manipulations and cryopreservation on progenitor cell viability and number, and to assist in predicting engraftment potential. Such tests are often referred to as “potency” assays. This term is imprecise, however, and a better approach is to use terminology that describes the property being measured in operational terms. Stem/progenitor cell assays can be broadly categorized into two types: phenotypic and functional assays. Phenotypic assays measure a physical property of the cells, most commonly the expression of a cell surface or intracellular protein that is present at higher levels on more primitive than differentiated cells. Functional assays measure a biological property of the cells, such as the ability to proliferate and differentiate into mature blood cells in vitro or in vivo. A key advantage of functional assays for evaluating hematopoietic cells intended for transplantation is that these latter properties are directly relevant to engraftment.
Table 1. "Potency" Assays Commonly Used to Evaluate Hematopoietic Cells for Transplantation.
- Simple
- Fast
- Inexpensive
- Low biological relevance
- Fast
- Standardized kits
- Misses apoptotic cells
- Phenotypes can change
- High instrument cost
- High variability
- Biological read-out
- Standardized reagents
- Long assay duration
- Variability of manual colony counting
TNC: total nucleated cells; CFU: colony-forming unit; CD34: cluster of differentiation antigen 34
The simplest method used routinely for assessing hematopoietic cell grafts is to count the total number of viable nucleated cells (TNC). This is typically done by staining with vital dyes (e.g. trypan blue) that are passively absorbed across the cell membrane of dead or damaged cells but are not quickly absorbed by healthy living cells. The TNC content (or overall size) of a graft predictably correlates with successful engraftment following transplantation. This finding naturally drives physicians to select larger grafts for transplantation. TNC counts alone are of limited value, however, because the stem and progenitor cells that mediate engraftment represent only a very small fraction of non-purified BM or blood cells. As the frequency (percent) of stem and progenitor cells in a cell sample varies, for example between individual donors or between fresh vs. thawed cryopreserved cells, the reliability of the TNC count alone as an accurate measurement of HSPC numbers diminishes significantly. The largest graft may not always be the one containing the highest number of viable HSPCs.
i) Phenotyping Assays:
The discovery in the mid-1980’s that most HSPCs express the cell surface protein CD34 facilitated a more direct measurement of primitive cells that mediate engraftment.4 CD34-positive cells typically represent approximately ~1-4% of BM, MPB or CB cells and can be readily enumerated by flow cytometry following staining with a CD34-specific monoclonal antibody. The advantage of the CD34 assay is that it can be completed in a few hours so the number of CD34 cells can be used prospectively to predict the engraftment potential of a stem cell product. The International Society for Cellular Therapy (ISCT; formerly the International Society for Hematotherapy and Graft Engineering [ISHAGE]) has established a protocol for staining cells with anti-CD34 antibodies and standardized kits are available commercially. The gating criteria are complex, however, and there remains widespread variation in how the assay is deployed. This has resulted in a considerable variation in the accuracy of CD34+ cell enumeration that is probably not widely appreciated.5 Indeed, the coefficient of variation of the CD34 assay is not significantly lower than that of the colony-forming unit (CFU) assay when colonies are counted manually.6 Numerous clinical studies have demonstrated a positive correlation between the number of CD34 cells in different hematopoietic cell grafts and the speed of hematological recovery; for an example see.7 However, the CD34 assay also has several disadvantages. Foremost, it is a phenotyping assay that measures a physical property of HSPCs as a surrogate assessment of their biological function. The physical properties of primitive hematopoietic cells, like CD34 expression, can change when cells are subjected to different manipulations, for example when they are maintained in culture. Second, in thawed cryopreserved cells, measuring the total number of viable CD34 cells alone will typically over-estimate the number of functional stem and progenitor cells. This is because the CD34 phenotyping assay used routinely in clinical laboratories does not identify cells that have been damaged by this process and that have begun to undergo apoptosis.8 Such cells will die within days after thawing and will not contribute to engraftment following transplantation. Viable and functional stem and progenitor cells typically comprise only a minority (~10-20%) of CD34+ cells, depending on the tissue.
When is a Phenotyping Assay Not Enough?
Arguably the most important advantage of phenotyping assays is their speed. The percentage of ‘positive’ cells can typically be quantitated within hours by flow cytometry. A rapid answer affords the opportunity to gain insight into the anticipated rate of engraftment and, in the case of allogeneic CB transplantation, can help guide selection of the most appropriate cryopreserved unit(s) for infusion. The advantage of assay speed diminishes, however, when the surrogate end-point being measured (e.g. the percent of CD34+ cells) changes in a different way than the biological function of the cell that the phenotypic assay is meant to detect. A good example of the divergence of phenotypic and functional assay results is found in a comparison of fresh and cryopreserved cells. In fresh CB, for example, progenitor cells identified by their functional ability to produce colonies in semi-solid cultures, called colony-forming cells (CFCs) or colony-forming units (CFUs), represent a low but relatively predictable proportion of the total CD34+ population (~10-20%).
Table 2. Key Studies Demonstrating a Positive Correlation Between Graft CFU Content and Hematopoietic Engraftment Following HSPC Transplantation
| Study | No. Patients | Cancer | HSC Source | Cells Tested in CFU Assay | Correlations in Univariate Analysis Between the Indicated Assay and Clinical Parameter | |
|---|---|---|---|---|---|---|
| Hogge et al.9 | 65 | Lymphoid cancers, solid tumors | MPB | Post-thaw |
CD34+ vs. PLT: CFU vs. PLT: |
p = 0.0001 p < 0.0001 |
| Migliaccio et al.10 | 204 | Leukemias, MDS, genetic diseases | Unrelated CB | Pre-cryo |
TNC vs. NEU: TNC vs. PLT: CFU vs. NEU: CFU vs. PLT: |
p < 0.0001 p = 0.007 p < 0.0001 p = 0.0001 |
| Iori et al.11 | 20 (long-term follow-up) | Leukemias | Unrelated CB | Post-thaw |
TNC vs. OS, LFS, EFS: CD34+ vs. OS, LFS, EFS: CFU vs. OS: CFU vs. DFS: CFU vs. EFS: |
NS NS p = 0.001 p = 0.002 p = 0.002 |
| Yoo et al.12 | 35 | Leukemias, BM failure, solid tumors | Unrelated CB | Post-thaw |
TNC vs. NEU: TNC vs. PLT: CD34 vs. NEU: CD34 vs. PLT: CFU vs. NEU: CFU vs. PLT: |
p = 0.04 NS p = 0.004 NS p = 0.004 p = 0.02 |
| Kozlowska-Skrzypczak et al.13 | 52 | AML | Autologous BM | Post-thaw |
CFU vs. NEU: CD34+ vs. NEU: TNC vs. NEU: |
p = 0.056 NS NS |
| Prasad et al.14 | 159 | Inherited metabolic disorders | Unrelated CB | Post-thaw |
TNC vs. NEU: TNC vs. PLT: TNC vs. OS: CD34+ vs. NEU: CD34+ vs. PLT: CD34+ vs. OS: CFU vs. NEU: CFU vs. PLT: CFU vs. OS: |
p < 0.01 p = 0.02 NS p < 0.01 p = 0.02 NS p < 0.0001 p < 0.0001 p = 0.01 |
| Page et al.2 | 435 | Cancer, BM failure, Inherited metabolic disorders | Unrelated CB | Post-thaw |
TNC vs. NEU: TNC vs. PLT: CD34+ vs. NEU: CD34+ vs. PLT: CFU vs. NEU: CFU vs. PLT: |
HR = 2.1 HR = 2.4 HR = 2.3 HR = 2.6 HR = 3.6 HR = 3.2 |
Studies use different statistical methods to determine correlations and significance. The individual papers should be consulted for details. In most cases, p values are shown. In one study the hazard ratios (HR) are shown only for the patients transplanted with the highest of several cell doses tested, but this cell dose is equivalent for all clinical parameters. In studies that determined correlations for both pre-cryopreservation (pre-cryo) and post-thaw cells, only the latter are shown for brevity.
BM: bone marrow; CB: cord blood; TNC: total nucleated cells; CFU: colony-forming units; MDS: myelodysplastic syndrome; PLT: platelet engraftment to 50,000/µL; NEU: neutrophil engraftment to 500/µL; OS: overall survival; LFS: leukemia-free survival; EFS: event-free survival. NS: not significant
Cell viability in both the CD34+ and CFU population is high (>95%) and CD34+ cells can thus be used as a relatively reliable surrogate measurement of CFU numbers. The picture changes, however, after cryopreservation. In thawed CB cells, for example, the proportion of viable CD34+ cells usually remains relatively high, at least when measured using conventional methods that do not identify cells that have begun to undergo apoptosis. Compared to their numbers in the pre-cryopreservation sample, the recovery of CD34+ cells after thawing thus often approaches >80%. Conversely, a functional measurement of CB CFU content demonstrates that only ~20% are recovered after thawing.2 In this case, the use of a phenotyping assay will over-estimate the actual number of viable progenitor cells. As hematopoietic grafts from different donors will be impacted in different ways by manipulations such as freezing and thawing, the use of a phenotyping assay has the potential to adversely affect decisions about which graft might contain the highest number of stem/progenitor cells and compromise clinical outcome.
ii) Functional Assays:
Human HSCs can only be definitively identified using a functional assay that directly measures properties that are relevant to engraftment, such as proliferation and differentiation. In a research lab setting, human HSCs are assayed by transplantation into genetically immune-compromised (e.g. NOD-SCID) mice. HSCs are measured retrospectively when human blood cells of multiple lineages are detected in the recipient mice at least 5 weeks after transplantation. Unfortunately, this type of xenotransplantation assay is expensive and impractical for routine use in a clinical laboratory. In this setting, an in vitro assay that measures the number of functional progenitor cells able to produce colonies of hematopoietic cells in methylcellulose-based culture medium supplemented with stimulatory growth factors offers the best alternative. The CFU assay has several important advantages over the phenotyping assays described above. First, it measures a functional property directly relevant to engraftment; i.e. the ability of a progenitor cell to divide and produce daughter blood cells of different lineages. Second, only viable cells that have not begun to undergo apoptosis are detected in the CFU assay. This ensures that the number of progenitor cells is not over-estimated as can happen with some phenotyping assays. Third, the CFU assay directly measures the number of clonogenic cells. In other words, unlike in the CD34 assay, in which on
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